5SR6
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z3011799020 - (R) isomer
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-11-11 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.88557 |
| Spacegroup name | P 43 |
| Unit cell lengths | 88.762, 88.762, 39.582 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.700 - 1.050 |
| R-factor | 0.1365 |
| Rwork | 0.136 |
| R-free | 0.15330 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | XDS (Jan 10, 2022) |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.700 | 39.700 | 1.120 |
| High resolution limit [Å] | 1.050 | 3.150 | 1.050 |
| Rmerge | 0.050 | 0.035 | 0.491 |
| Rmeas | 0.055 | 0.038 | 0.536 |
| Total number of observations | 916414 | ||
| Number of reflections | 142745 | 5538 | 22841 |
| <I/σ(I)> | 14.29 | 39.06 | 2.34 |
| Completeness [%] | 99.8 | 99.9 | 99.3 |
| Redundancy | 6.42 | 6.319 | 6.283 |
| CC(1/2) | 0.999 | 0.999 | 0.936 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 100 mM CHES, 28% PEG 3000 |






