5SQI

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5016127255 - (R,R) and (S,S) isomers

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	ALS BEAMLINE 8.3.1
Synchrotron site	ALS
Beamline	8.3.1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-10-15
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.88557
Spacegroup name	P 43
Unit cell lengths	88.690, 88.690, 39.377
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	39.660 - 1.050
R-factor	0.1403
Rwork	0.139
R-free	0.15820
Structure solution method	MOLECULAR REPLACEMENT
Data reduction software	XDS (Jan 10, 2022)
Data scaling software	XSCALE
Phasing software	PHASER (2.8.3)
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	39.660	39.660	1.110
High resolution limit [Å]	1.050	3.150	1.050
Rmerge	0.074	0.051	0.655
Rmeas	0.080	0.056	0.715
Total number of observations	909486
Number of reflections	142402	5511	22902
<I/σ(I)>	9.85	27.16	1.52
Completeness [%]	99.9	99.8	99.8
Redundancy	6.387	6.218	6.247
CC(1/2)	0.999	0.998	0.868

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	9.5	293	100 mM CHES, 28% PEG 3000