Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SPS

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with FRESH00012962804 - (S) isomer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-29
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.88557
Spacegroup nameP 43
Unit cell lengths88.686, 88.686, 39.280
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.910 - 1.050
R-factor0.1507
Rwork0.150
R-free0.16700
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS (Jan 10, 2022)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]35.91035.9101.120
High resolution limit [Å]1.0503.1501.050
Rmerge0.0360.0230.830
Rmeas0.0390.0250.905
Total number of observations923627
Number of reflections141657548322768
<I/σ(I)>19.9571.22.1
Completeness [%]99.999.699.6
Redundancy6.526.4016.311
CC(1/2)1.0000.9990.877
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.5293100 mM CHES, 28% PEG 3000

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon