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5SOI

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000078036511 - (R) and (S) isomers

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-17
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.88557
Spacegroup nameP 43
Unit cell lengths88.780, 88.780, 39.468
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.390 - 1.050
R-factor0.1387
Rwork0.138
R-free0.15570
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS (Jan 10, 2022)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.39044.3901.110
High resolution limit [Å]1.0503.1401.050
Rmerge0.0310.0200.549
Rmeas0.0330.0220.599
Total number of observations935308
Number of reflections142951552022949
<I/σ(I)>24.0783.173.06
Completeness [%]99.899.599.6
Redundancy6.5436.4196.371
CC(1/2)1.0000.9990.936
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.5293100 mM CHES, 28% PEG 3000

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