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5SKC

Crystal Structure of human phosphodiesterase 10 in complex with 6-methyl-N-(1-propan-2-ylpyrazol-3-yl)-3-(pyrimidin-5-ylamino)pyridine-2-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyCCD
Collection date2008-09-15
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.000000
Spacegroup nameH 3
Unit cell lengths136.690, 136.690, 236.140
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.870 - 2.600
R-factor0.2174
Rwork0.216
R-free0.24230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.009
RMSD bond angle0.890
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.7 (19-MAR-2020))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.87043.8702.660
High resolution limit [Å]2.59011.5802.590
Rmerge0.1110.0302.730
Rmeas0.1250.0343.066
Total number of observations247733
Number of reflections509045603672
<I/σ(I)>10.0837.030.62
Completeness [%]99.595.697.4
Redundancy4.8674.6044.875
CC(1/2)0.9980.9990.191
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52955-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2

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