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5SJG

Crystal Structure of human phosphodiesterase 10 in complex with 1-[2-[2-(5,8-dimethyl-[1,2,4]triazolo[1,5-c]pyrimidin-2-yl)ethyl]-1-methylimidazol-4-yl]pyrrolidin-2-one

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-02-16
DetectorPSI PILATUS 6M
Wavelength(s)0.999940
Spacegroup nameH 3
Unit cell lengths135.482, 135.482, 235.361
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.580 - 1.970
R-factor0.1784
Rwork0.176
R-free0.22420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.012
RMSD bond angle1.745
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.58043.5802.020
High resolution limit [Å]1.9708.8101.970
Rmerge0.0700.0181.096
Rmeas0.0780.0201.228
Total number of observations578327
Number of reflections11369012748414
<I/σ(I)>16.1663.141.51
Completeness [%]99.899.399.9
Redundancy5.0875.3774.949
CC(1/2)0.9990.9990.581
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52955-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2

220113

PDB entries from 2024-05-22

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