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5SJC

Crystal Structure of human phosphodiesterase 10 in complex with 4-chloro-2,5-dimethyl-N-(2-phenylimidazo[1,2-a]pyrimidin-7-yl)pyrazole-3-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2010-02-01
DetectorPSI PILATUS 6M
Wavelength(s)0.999900
Spacegroup nameI 2 3
Unit cell lengths141.205, 141.205, 141.205
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.920 - 2.080
R-factor0.1772
Rwork0.176
R-free0.20000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.005
RMSD bond angle1.239
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.92049.9202.130
High resolution limit [Å]2.0809.3002.080
Rmerge0.0950.0272.555
Rmeas0.0970.0282.622
Total number of observations572098
Number of reflections281753532055
<I/σ(I)>22.5582.491.33
Completeness [%]99.998.9100
Redundancy20.30518.36319.878
CC(1/2)1.0001.0000.527
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52955-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2

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PDB entries from 2024-05-15

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