5SIL
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH C(Nc2ccc1[nH]c(nc1c2)c3cc(cc(c3)C)C)(=O)c4c(cnn4C)Cl, micromolar IC50=0.245656
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.001500 |
Spacegroup name | I 2 3 |
Unit cell lengths | 141.534, 141.534, 141.534 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.760 - 2.500 |
R-factor | 0.1748 |
Rwork | 0.172 |
R-free | 0.23090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.471 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.760 | 44.760 | 2.570 |
High resolution limit [Å] | 2.500 | 11.180 | 2.500 |
Rmerge | 0.139 | 0.055 | 1.257 |
Rmeas | 0.152 | 0.061 | 1.377 |
Total number of observations | 105590 | ||
Number of reflections | 16420 | 194 | 1211 |
<I/σ(I)> | 9.86 | 31.06 | 1.44 |
Completeness [%] | 99.7 | 92.4 | 100 |
Redundancy | 6.431 | 5.866 | 5.995 |
CC(1/2) | 0.996 | 0.996 | 0.535 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |