5SID
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c2c(Cl)c1nc(nn1c(c2Cl)C)CCc4nc3cc(ccc3s4)Cl, micromolar IC50=0.010696
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-09-07 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999940 |
Spacegroup name | H 3 |
Unit cell lengths | 135.693, 135.693, 235.636 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.740 - 1.980 |
R-factor | 0.1746 |
Rwork | 0.172 |
R-free | 0.21770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.011 |
RMSD bond angle | 1.693 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.740 | 43.740 | 2.030 |
High resolution limit [Å] | 1.980 | 8.850 | 1.980 |
Rmerge | 0.067 | 0.017 | 1.169 |
Rmeas | 0.074 | 0.019 | 1.303 |
Total number of observations | 583168 | ||
Number of reflections | 112607 | 1269 | 8357 |
<I/σ(I)> | 16.5 | 71.11 | 1.46 |
Completeness [%] | 99.9 | 99.2 | 99.9 |
Redundancy | 5.179 | 5.191 | 5.151 |
CC(1/2) | 0.999 | 1.000 | 0.542 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |