Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SI2

Crystal Structure of human phosphodiesterase 10 in complex with 6-cyclopropyl-N-(1-pyridin-2-ylpyrrolidin-3-yl)-3-(pyrimidin-5-ylamino)pyridine-2-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyCCD
Collection date2009-07-14
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.999900
Spacegroup nameH 3
Unit cell lengths134.679, 134.679, 234.138
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.260 - 2.400
R-factor0.2134
Rwork0.210
R-free0.27860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.011
RMSD bond angle1.788
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.26041.2602.460
High resolution limit [Å]2.40010.7302.400
Rmerge0.0640.0220.873
Rmeas0.0830.0291.113
Total number of observations126945
Number of reflections576214954530
<I/σ(I)>10.3837.711.18
Completeness [%]93.071.399
Redundancy2.2032.3372.182
CC(1/2)0.9980.9980.484
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52955-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon