5SH8
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH n1c(cc(n1c2ccccc2)NC(c3c(ccc(n3)C)Nc4cncnc4)=O)C, micromolar IC50=0.007593
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-09-30 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.978500 |
Spacegroup name | H 3 |
Unit cell lengths | 135.510, 135.510, 235.290 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.540 - 2.000 |
R-factor | 0.1613 |
Rwork | 0.160 |
R-free | 0.18580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.017 |
RMSD bond angle | 1.946 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.540 | 41.540 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.109 | 0.045 | 1.460 |
Rmeas | 0.128 | 0.053 | 1.714 |
Total number of observations | 402436 | ||
Number of reflections | 108616 | 1177 | 7993 |
<I/σ(I)> | 7.34 | 18.09 | 1 |
Completeness [%] | 99.7 | 97.1 | 98.3 |
Redundancy | 3.705 | 3.499 | 3.612 |
CC(1/2) | 0.994 | 0.994 | 0.168 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |