5SEY
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH n1(C)c(nc(c1)c2ccccc2)C#Cc5nn3c(nc(c3CO)C4CC4)cc5, micromolar IC50=0.046595
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-12-11 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999910 |
Spacegroup name | H 3 |
Unit cell lengths | 135.139, 135.139, 235.509 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.700 - 2.290 |
R-factor | 0.1756 |
Rwork | 0.173 |
R-free | 0.23420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.012 |
RMSD bond angle | 1.810 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.700 | 43.700 | 2.350 |
High resolution limit [Å] | 2.290 | 10.240 | 2.290 |
Rmerge | 0.064 | 0.015 | 0.977 |
Rmeas | 0.073 | 0.017 | 1.110 |
Total number of observations | 314589 | ||
Number of reflections | 72093 | 798 | 5330 |
<I/σ(I)> | 15.99 | 73.32 | 1.42 |
Completeness [%] | 99.8 | 98.4 | 99.7 |
Redundancy | 4.364 | 4.294 | 4.447 |
CC(1/2) | 0.999 | 1.000 | 0.544 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |