5SEQ
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c1(nn(c(n1)CCc2nn3c(n2)c(nc(c3C)C)C)C)N4CCCC4, micromolar IC50=0.037262
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-05-10 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999790 |
Spacegroup name | H 3 |
Unit cell lengths | 135.275, 135.275, 235.377 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.680 - 2.180 |
R-factor | 0.1751 |
Rwork | 0.172 |
R-free | 0.22910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.011 |
RMSD bond angle | 1.686 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.680 | 43.680 | 2.240 |
High resolution limit [Å] | 2.180 | 9.750 | 2.180 |
Rmerge | 0.057 | 0.016 | 1.062 |
Rmeas | 0.066 | 0.018 | 1.210 |
Total number of observations | 356676 | ||
Number of reflections | 83714 | 924 | 6187 |
<I/σ(I)> | 16.86 | 72.31 | 1.41 |
Completeness [%] | 99.9 | 98.6 | 100 |
Redundancy | 4.261 | 4.155 | 4.328 |
CC(1/2) | 0.999 | 1.000 | 0.525 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |