5SED
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c1c(cc2c(c1)nc(nc2N3CCOCC3)OCc4nc(cn4C)c5ccccc5)Cl, micromolar IC50=0.00213
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-02-07 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000000 |
Spacegroup name | H 3 |
Unit cell lengths | 135.193, 135.193, 235.868 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.490 - 2.320 |
R-factor | 0.1941 |
Rwork | 0.192 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.484 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.490 | 43.490 | 2.380 |
High resolution limit [Å] | 2.320 | 10.380 | 2.320 |
Rmerge | 0.099 | 0.025 | 0.773 |
Rmeas | 0.110 | 0.028 | 0.857 |
Total number of observations | 360959 | ||
Number of reflections | 69315 | 769 | 5143 |
<I/σ(I)> | 12.87 | 53.21 | 2.02 |
Completeness [%] | 99.6 | 98.6 | 100 |
Redundancy | 5.208 | 4.995 | 5.354 |
CC(1/2) | 0.998 | 0.999 | 0.716 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |