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5SDA

Crystal Structure of Dihydrofolate Reductase from Homo sapiens bound to NADP and SDDC Inhibitor SDDC-774

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2016-07-15
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 43 21 2
Unit cell lengths74.300, 74.300, 143.630
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.341 - 2.450
R-factor0.1652
Rwork0.161
R-free0.20540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.011
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_2481)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.510
High resolution limit [Å]2.45010.9602.450
Rmerge0.0880.0320.472
Rmeas0.0940.0350.503
Total number of observations121264
Number of reflections153832051119
<I/σ(I)>19.5944.554.35
Completeness [%]99.494100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP289MCSG2 E5 (273949e5): 200mM Lithium sulfate, 100mM Sodium acetate:acetic acid pH4.5, 30% (w/v) PEG8000; prot conc 26mg/mL, cryo 20% EG, puck ogi6-2

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