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5SC3

CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z422471910

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-14
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91808
Spacegroup nameP 1 21 1
Unit cell lengths30.890, 82.054, 32.255
Unit cell angles90.00, 117.64, 90.00
Refinement procedure
Resolution41.030 - 1.240
R-factor0.1484
Rwork0.147
R-free0.17200
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2jcp
RMSD bond length0.010
RMSD bond angle1.130
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareBUSTER (2.10.4 (20-APR-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.02741.0271.321
High resolution limit [Å]1.2403.7071.240
Rmeas0.0720.0520.483
Rpim0.0380.0280.275
Total number of observations10304353764027
Number of reflections30430
<I/σ(I)>7.7171.8
Completeness [%]80.798.529.7
Redundancy3.43.52.6
CC(1/2)0.9980.9970.801
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME

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PDB entries from 2024-08-14

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