5SC3
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z422471910
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-07-14 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.91808 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 30.890, 82.054, 32.255 |
| Unit cell angles | 90.00, 117.64, 90.00 |
Refinement procedure
| Resolution | 41.030 - 1.240 |
| R-factor | 0.1484 |
| Rwork | 0.147 |
| R-free | 0.17200 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 2jcp |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.130 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | REFMAC |
| Refinement software | BUSTER (2.10.4 (20-APR-2021)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.027 | 41.027 | 1.321 |
| High resolution limit [Å] | 1.240 | 3.707 | 1.240 |
| Rmeas | 0.072 | 0.052 | 0.483 |
| Rpim | 0.038 | 0.028 | 0.275 |
| Total number of observations | 103043 | 5376 | 4027 |
| Number of reflections | 30430 | ||
| <I/σ(I)> | 7.7 | 17 | 1.8 |
| Completeness [%] | 80.7 | 98.5 | 29.7 |
| Redundancy | 3.4 | 3.5 | 2.6 |
| CC(1/2) | 0.998 | 0.997 | 0.801 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME |






