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5SBU

CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z839988838

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-05-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91808
Spacegroup nameP 1 21 1
Unit cell lengths30.860, 81.537, 32.053
Unit cell angles90.00, 117.68, 90.00
Refinement procedure
Resolution15.160 - 1.044
R-factor0.1641
Rwork0.163
R-free0.17930
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2jcp
RMSD bond length0.010
RMSD bond angle1.180
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareBUSTER (2.10.4 (20-APR-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.38628.3861.100
High resolution limit [Å]1.0443.0651.044
Rmeas0.0640.0540.357
Rpim0.0350.0290.251
Total number of observations15462489334344
Number of reflections52305
<I/σ(I)>11.523.42.3
Completeness [%]82.697.732.2
Redundancy33.41.7
CC(1/2)0.9980.9970.840
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME

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PDB entries from 2024-07-10

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