5SB1
DDR1, 4-chloro-N-[(3S,4R)-4-phenylpyrrolidin-3-yl]-3-(1H-pyrrolo[2,3-b]pyridin-5-yloxymethyl)benzamide, 1.530A, P212121, Rfree=21.4%
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-10-04 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 1.000020 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 62.102, 74.248, 76.686 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.636 - 1.530 |
| R-factor | 0.1902 |
| Rwork | 0.189 |
| R-free | 0.21450 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | inhouse model |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.047 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (dev_1803) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.640 | 47.636 | 1.570 |
| High resolution limit [Å] | 1.530 | 6.840 | 1.530 |
| Rmerge | 0.052 | 0.026 | 1.979 |
| Rmeas | 0.057 | 0.029 | 2.152 |
| Total number of observations | 355958 | ||
| Number of reflections | 54222 | 707 | 3945 |
| <I/σ(I)> | 14.19 | 49.74 | 0.9 |
| Completeness [%] | 99.9 | 99 | 99.7 |
| Redundancy | 6.6 | 5.557 | 6.473 |
| CC(1/2) | 0.999 | 0.998 | 0.407 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 11.4 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed with reservoir consisting of 0.1M MES pH 6.0, 0.1M MgChloride, 8% PEG 6000 |






