5S9M
AUTOTAXIN, (3,5-dichlorophenyl)methyl (3aS,8aR)-2-(1H-benzotriazole-5-carbonyl)-1,3,3a,4,5,7,8,8a-octahydropyrrolo[3,4-d]azepine-6-carboxylate, 1.80A, P212121, Rfree=21.1%
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-27 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.99985 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.017, 91.009, 119.028 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.370 - 1.800 |
R-factor | 0.1734 |
Rwork | 0.171 |
R-free | 0.21070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in-house model |
RMSD bond length | 0.016 |
RMSD bond angle | 1.791 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0018) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.370 | 1.847 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.100 | 0.729 |
Rmeas | 0.123 | 0.032 |
Total number of observations | 553317 | |
Number of reflections | 82778 | 1074 |
<I/σ(I)> | 10.75 | 1.45 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 6.57 | 6.52 |
CC(1/2) | 0.998 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 15.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL |