5S9E
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9127 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.069, 27.088, 55.915 |
Unit cell angles | 90.00, 100.38, 90.00 |
Refinement procedure
Resolution | 39.900 - 1.180 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.20080 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5rji |
RMSD bond length | 0.011 |
RMSD bond angle | 1.623 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.870 | 39.870 | 1.240 |
High resolution limit [Å] | 1.180 | 3.730 | 1.180 |
Rmerge | 0.055 | 0.049 | 0.404 |
Rmeas | 0.066 | 0.059 | 0.554 |
Rpim | 0.037 | 0.032 | 0.377 |
Total number of observations | 75717 | 4048 | 4129 |
Number of reflections | 29598 | ||
<I/σ(I)> | 9.3 | 23.5 | 1.6 |
Completeness [%] | 74.3 | 94.5 | 59.7 |
Redundancy | 2.6 | 3.2 | 1.2 |
CC(1/2) | 0.996 | 0.992 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M POTASSIUM PHOSPHATE |