5S8V
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9159 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.715, 27.316, 56.070 |
Unit cell angles | 90.00, 100.11, 90.00 |
Refinement procedure
Resolution | 40.260 - 1.180 |
R-factor | 0.1778 |
Rwork | 0.176 |
R-free | 0.20570 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5rji |
RMSD bond length | 0.010 |
RMSD bond angle | 1.671 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.260 | 30.092 | 1.307 |
High resolution limit [Å] | 1.180 | 3.631 | 1.180 |
Rmeas | 0.036 | 0.027 | 0.405 |
Rpim | 0.020 | 0.015 | 0.279 |
Total number of observations | 76478 | 4421 | 1671 |
Number of reflections | 28785 | ||
<I/σ(I)> | 15 | 40.7 | 1.5 |
Completeness [%] | 88.7 | 97.3 | 45.9 |
Redundancy | 2.7 | 3.1 | 1.2 |
CC(1/2) | 0.999 | 0.999 | 0.875 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M POTASSIUM PHOSPHATE |