5RZ8
EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z1263714198
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-07-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.91587 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 38.580, 77.040, 99.920 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.950 - 1.660 |
| R-factor | 0.2138 |
| Rwork | 0.212 |
| R-free | 0.24730 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 6ibe |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.477 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.920 | 41.920 | 1.700 |
| High resolution limit [Å] | 1.660 | 7.420 | 1.660 |
| Rmerge | 0.088 | 0.029 | 1.667 |
| Rmeas | 0.095 | 0.032 | 1.850 |
| Rpim | 0.038 | 0.013 | 0.795 |
| Total number of observations | 227963 | 2676 | 14018 |
| Number of reflections | 36062 | ||
| <I/σ(I)> | 11.3 | 41.2 | 1 |
| Completeness [%] | 100.0 | 99.4 | 100 |
| Redundancy | 6.3 | 5.6 | 5.4 |
| CC(1/2) | 0.999 | 0.999 | 0.406 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 0.075M ammonium nitrate, 0.1M MES pH 6.0, 6.5% PEG 2000, 6.5% PEG 3350, 6.5% PEG 4000, 6.5% PEG 5000, 10% ethylene glycol |
