5RYP
EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z1929757385
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-07-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.91587 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 38.580, 77.010, 99.880 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.940 - 1.630 |
| R-factor | 0.2149 |
| Rwork | 0.213 |
| R-free | 0.24730 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 6ibe |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.542 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.900 | 41.900 | 1.670 |
| High resolution limit [Å] | 1.630 | 7.290 | 1.630 |
| Rmerge | 0.084 | 0.043 | 1.257 |
| Rmeas | 0.092 | 0.047 | 1.398 |
| Rpim | 0.036 | 0.020 | 0.600 |
| Total number of observations | 237678 | 2835 | 14702 |
| Number of reflections | 38029 | ||
| <I/σ(I)> | 11.1 | 31.5 | 1.2 |
| Completeness [%] | 99.9 | 99.4 | 100 |
| Redundancy | 6.2 | 5.6 | 5.3 |
| CC(1/2) | 0.998 | 0.997 | 0.521 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 0.075M ammonium nitrate, 0.1M MES pH 6.0, 6.5% PEG 2000, 6.5% PEG 3350, 6.5% PEG 4000, 6.5% PEG 5000, 10% ethylene glycol |
