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5RTM

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000002005

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-15
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.88557
Spacegroup nameP 43
Unit cell lengths88.706, 88.706, 39.518
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.670 - 1.000
R-factor0.1533
Rwork0.152
R-free0.16810
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS (0.94)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.67039.6701.060
High resolution limit [Å]1.0003.0001.000
Rmerge0.0390.0191.474
Rmeas0.0430.0211.621
Total number of observations1053395
Number of reflections164275639025431
<I/σ(I)>18.178.650.98
Completeness [%]99.299.795.6
Redundancy6.4126.385.763
CC(1/2)1.0001.0000.613
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.5293100 mM CHES, 28% PEG 3000

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