5ROC
PanDDA analysis group deposition -- Proteinase K crystal structure Apo65
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 68.314, 68.314, 106.501 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.367 - 1.523 |
R-factor | 0.2989 |
Rwork | 0.296 |
R-free | 0.35380 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.360 | 29.360 | 1.550 |
High resolution limit [Å] | 1.520 | 8.340 | 1.520 |
Rmerge | 0.020 | 0.011 | 0.162 |
Rmeas | 0.028 | 0.016 | 0.229 |
Rpim | 0.020 | 0.011 | 0.162 |
Total number of observations | 73229 | 448 | 3147 |
Number of reflections | 39124 | 299 | 1677 |
<I/σ(I)> | 13.3 | 27 | 2.9 |
Completeness [%] | 99.4 | 98 | 88.2 |
Redundancy | 1.9 | 1.5 | 1.9 |
CC(1/2) | 0.999 | 0.999 | 0.909 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 290 | 1.2M ammonium sulfate, 0.1M Tris-HCl, pH 8.0 |