Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5RKD

PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z2168282707

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97622
Spacegroup nameC 1 2 1
Unit cell lengths82.221, 26.773, 55.771
Unit cell angles90.00, 100.35, 90.00
Refinement procedure
Resolution54.860 - 1.237
R-factor0.1837
Rwork0.182
R-free0.20450
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3mb3
RMSD bond length0.008
RMSD bond angle0.870
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareBUSTER (2.10.3 (29-NOV-2019))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.44140.4411.375
High resolution limit [Å]1.2943.9191.294
Rmeas0.0540.0480.343
Rpim0.0210.0200.151
Total number of observations15075969845553
Number of reflections22631
<I/σ(I)>24.842.15.4
Completeness [%]80.997.134.8
Redundancy6.76.24.9
CC(1/2)0.9990.9980.964
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.627720% PEG 8000, 0.04M potassium phosphate

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon