5RJI
PanDDA analysis group deposition of ground-state model of PHIP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97622 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.712, 27.125, 55.930 |
Unit cell angles | 90.00, 100.20, 90.00 |
Refinement procedure
Resolution | 35.640 - 1.240 |
R-factor | 0.1666 |
Rwork | 0.166 |
R-free | 0.18680 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3mb3 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.875 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.620 | 35.620 | 1.280 |
High resolution limit [Å] | 1.240 | 5.410 | 1.240 |
Rmerge | 0.030 | 0.025 | 0.124 |
Rmeas | 0.033 | 0.028 | 0.167 |
Rpim | 0.013 | 0.011 | 0.111 |
Total number of observations | 151965 | 2590 | 413 |
Number of reflections | 25085 | ||
<I/σ(I)> | 29.8 | 53.2 | 4 |
Completeness [%] | 72.8 | 91.9 | 9.1 |
Redundancy | 6.1 | 6.2 | 1.7 |
CC(1/2) | 0.999 | 0.999 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M potassium phosphate |