5RE1
PanDDA analysis group deposition -- Endothiapepsin ground state model 58
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.176, 72.854, 52.425 |
Unit cell angles | 90.00, 109.20, 90.00 |
Refinement procedure
Resolution | 49.560 - 0.970 |
R-factor | 0.2441 |
Rwork | 0.244 |
R-free | 0.24411 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.017 |
RMSD bond angle | 1.856 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.560 | 50.000 | 1.030 |
High resolution limit [Å] | 0.970 | 2.900 | 0.970 |
Rmerge | 0.122 | 0.068 | 2.285 |
Rmeas | 0.134 | 0.075 | 2.569 |
Total number of observations | 1072661 | ||
Number of reflections | 164174 | 7121 | 15226 |
<I/σ(I)> | 7.69 | 23.74 | 0.5 |
Completeness [%] | 91.7 | 0.988 | 0.496 |
Redundancy | 6.162 | 5.84 | 2.1 |
CC(1/2) | 0.996 | 0.993 | 0.164 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |