5RCY
PanDDA analysis group deposition -- Endothiapepsin ground state model 20
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.328, 73.247, 52.471 |
Unit cell angles | 90.00, 109.09, 90.00 |
Refinement procedure
Resolution | 42.870 - 1.110 |
R-factor | 0.1593 |
Rwork | 0.159 |
R-free | 0.15932 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.016 |
RMSD bond angle | 1.930 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.870 | 50.000 | 1.170 |
High resolution limit [Å] | 1.110 | 3.300 | 1.100 |
Rmerge | 0.071 | 0.040 | 1.868 |
Rmeas | 0.077 | 0.043 | 2.029 |
Total number of observations | 860561 | ||
Number of reflections | 121523 | 4918 | 19373 |
<I/σ(I)> | 11 | 42.64 | 0.83 |
Completeness [%] | 98.6 | 0.99 | 0.924 |
Redundancy | 6.707 | 6.46 | 5.98 |
CC(1/2) | 0.999 | 0.998 | 0.316 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |