5RCU
PanDDA analysis group deposition -- Endothiapepsin ground state model 16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.100, 72.792, 52.208 |
Unit cell angles | 90.00, 109.32, 90.00 |
Refinement procedure
Resolution | 49.320 - 1.100 |
R-factor | 0.1664 |
Rwork | 0.166 |
R-free | 0.16640 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.019 |
RMSD bond angle | 1.977 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.320 | 50.000 | 1.170 |
High resolution limit [Å] | 1.100 | 3.300 | 1.100 |
Rmerge | 0.064 | 0.031 | 2.144 |
Rmeas | 0.070 | 0.033 | 2.320 |
Total number of observations | 847590 | ||
Number of reflections | 117892 | 4837 | 18437 |
<I/σ(I)> | 13.22 | 54.73 | 0.76 |
Completeness [%] | 97.3 | 0.994 | 0.896 |
Redundancy | 6.825 | 6.82 | 5.99 |
CC(1/2) | 0.999 | 0.999 | 0.355 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |