5RCP
PanDDA analysis group deposition -- Endothiapepsin ground state model 10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.208, 73.191, 52.515 |
Unit cell angles | 90.00, 109.42, 90.00 |
Refinement procedure
Resolution | 42.670 - 1.080 |
R-factor | 0.1708 |
Rwork | 0.170 |
R-free | 0.17085 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.016 |
RMSD bond angle | 1.955 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.670 | 50.000 | 1.140 |
High resolution limit [Å] | 1.080 | 3.210 | 1.070 |
Rmerge | 0.079 | 0.045 | 1.976 |
Rmeas | 0.086 | 0.049 | 2.140 |
Total number of observations | 921421 | ||
Number of reflections | 129990 | 5277 | 20769 |
<I/σ(I)> | 9.65 | 36.61 | 0.69 |
Completeness [%] | 97.8 | 0.986 | 0.919 |
Redundancy | 6.711 | 6.53 | 6.07 |
CC(1/2) | 0.999 | 0.998 | 0.333 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |