5RCI
PanDDA analysis group deposition -- Endothiapepsin ground state model 03
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.140, 72.759, 52.398 |
Unit cell angles | 90.00, 109.38, 90.00 |
Refinement procedure
Resolution | 42.620 - 1.230 |
R-factor | 0.1617 |
Rwork | 0.161 |
R-free | 0.16169 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.017 |
RMSD bond angle | 1.926 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.620 | 50.000 | 1.300 |
High resolution limit [Å] | 1.230 | 3.660 | 1.230 |
Rmerge | 0.077 | 0.052 | 1.184 |
Rmeas | 0.083 | 0.056 | 1.286 |
Total number of observations | 620736 | ||
Number of reflections | 87494 | 3586 | 14213 |
<I/σ(I)> | 11.82 | 31.75 | 1.77 |
Completeness [%] | 98.5 | 0.995 | 0.943 |
Redundancy | 6.734 | 6.81 | 6.11 |
CC(1/2) | 0.998 | 0.997 | 0.622 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |