5RCG
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library H11a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.235, 73.080, 52.305 |
Unit cell angles | 90.00, 109.10, 90.00 |
Refinement procedure
Resolution | 40.970 - 1.230 |
R-factor | 0.1556 |
Rwork | 0.155 |
R-free | 0.15561 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.014 |
RMSD bond angle | 1.814 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.970 | 50.000 | 1.310 |
High resolution limit [Å] | 1.230 | 3.690 | 1.230 |
Rmerge | 0.083 | 0.056 | 0.652 |
Rmeas | 0.090 | 0.061 | 0.705 |
Total number of observations | 609737 | ||
Number of reflections | 84651 | 3442 | 13541 |
<I/σ(I)> | 12.64 | 29.37 | 2.86 |
Completeness [%] | 96.7 | 0.971 | 0.913 |
Redundancy | 6.844 | 6.22 | 6.24 |
CC(1/2) | 0.997 | 0.996 | 0.879 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |