5RCE
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library H05a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.277, 72.544, 52.348 |
Unit cell angles | 90.00, 109.60, 90.00 |
Refinement procedure
Resolution | 42.690 - 1.050 |
R-factor | 0.1649 |
Rwork | 0.164 |
R-free | 0.16488 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.014 |
RMSD bond angle | 1.776 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.690 | 50.000 | 0.980 |
High resolution limit [Å] | 1.050 | 2.780 | 0.930 |
Rmerge | 0.053 | 0.033 | 2.888 |
Rmeas | 0.057 | 0.036 | 3.202 |
Total number of observations | 1245875 | ||
Number of reflections | 133950 | 7998 | 16048 |
<I/σ(I)> | 13.86 | 48.38 | 0.44 |
Completeness [%] | 85.7 | 0.972 | 0.458 |
Redundancy | 6.713 | 6.43 | 2.42 |
CC(1/2) | 0.999 | 0.998 | 0.197 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |