5RC4
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library F04a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.238, 72.821, 52.411 |
Unit cell angles | 90.00, 109.25, 90.00 |
Refinement procedure
Resolution | 42.740 - 1.000 |
R-factor | 0.1597 |
Rwork | 0.159 |
R-free | 0.15972 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.015 |
RMSD bond angle | 1.809 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.740 | 50.000 | 0.970 |
High resolution limit [Å] | 1.000 | 2.750 | 0.920 |
Rmerge | 0.049 | 0.038 | 1.590 |
Rmeas | 0.053 | 0.041 | 1.811 |
Total number of observations | 1267948 | ||
Number of reflections | 162625 | 8168 | 18135 |
<I/σ(I)> | 15.9 | 46.81 | 0.69 |
Completeness [%] | 87.7 | 0.963 | 0.504 |
Redundancy | 6.477 | 6.36 | 2.17 |
CC(1/2) | 0.998 | 0.997 | 0.267 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |