5RC1
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library E07a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.341, 73.185, 52.587 |
Unit cell angles | 90.00, 109.33, 90.00 |
Refinement procedure
Resolution | 42.820 - 1.050 |
R-factor | 0.1789 |
Rwork | 0.178 |
R-free | 0.17890 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.988 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.820 | 50.000 | 1.110 |
High resolution limit [Å] | 1.050 | 3.140 | 1.050 |
Rmerge | 0.080 | 0.050 | 3.392 |
Rmeas | 0.087 | 0.055 | 3.697 |
Total number of observations | 978199 | ||
Number of reflections | 139306 | 5727 | 21851 |
<I/σ(I)> | 8.66 | 32.79 | 0.42 |
Completeness [%] | 98.2 | 0.992 | 0.898 |
Redundancy | 6.603 | 6.52 | 5.67 |
CC(1/2) | 0.998 | 0.998 | 0.292 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |