Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5R8Y

PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment N08078b in complex with MAP kinase p38-alpha

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.909, 86.470, 126.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.257 - 1.679
R-factor0.1789
Rwork0.178
R-free0.19810
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)6so1
Data reduction softwareXDS
Data scaling softwareAimless (0.5.17)
Phasing softwareREFMAC
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.26029.2601.720
High resolution limit [Å]1.6807.5101.680
Rmerge0.0490.0220.749
Rmeas0.0530.0240.811
Rpim0.0210.0100.309
Total number of observations384788468427864
Number of reflections58340
<I/σ(I)>21.669.42.4
Completeness [%]99.798.297.9
Redundancy6.66.26.6
CC(1/2)0.9990.9990.778
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.929127.5% PEG3350, 0.1 M Bis-Tris propane, pH 6.9, 50 mM ammonium sulfate, 0.2 M 1:1 magnesium chloride:magnesium sulfate, 10% glycerol

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon