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5R8C

PanDDA analysis group deposition INTERLEUKIN-1 BETA -- Fragment Z30857828 in complex with INTERLEUKIN-1 BETA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.96871
Spacegroup nameP 43
Unit cell lengths54.520, 54.520, 75.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.580 - 1.540
R-factor0.1902
Rwork0.189
R-free0.21390
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2nvh
RMSD bond length0.012
RMSD bond angle1.757
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]38.55038.5501.580
High resolution limit [Å]1.5406.8901.540
Rmerge0.0430.0291.558
Rmeas0.0470.0311.691
Rpim0.0180.0130.654
Total number of observations215120242715927
Number of reflections32684
<I/σ(I)>1952.61.2
Completeness [%]100.099.5100
Redundancy6.66.36.6
CC(1/2)0.9990.9970.453
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.92912.8M ammonium sulphate, 0.1M Tris pH7.9

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PDB entries from 2024-09-04

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