5R4L
PanDDA analysis group deposition -- CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF in complex with FMOPL000349a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 111.980, 27.410, 38.250 |
Unit cell angles | 90.00, 96.35, 90.00 |
Refinement procedure
Resolution | 55.710 - 1.130 |
R-factor | 0.1929 |
Rwork | 0.192 |
R-free | 0.20910 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3uv2 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.232 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.610 | 26.610 | 1.160 |
High resolution limit [Å] | 1.130 | 5.050 | 1.130 |
Rmerge | 0.030 | 0.016 | 0.470 |
Rmeas | 0.036 | 0.020 | 0.658 |
Rpim | 0.020 | 0.011 | 0.459 |
Total number of observations | 104198 | 1522 | 1775 |
Number of reflections | 39799 | ||
<I/σ(I)> | 16.7 | 55.7 | 1.5 |
Completeness [%] | 91.1 | 95.2 | 46 |
Redundancy | 2.6 | 3 | 1.2 |
CC(1/2) | 0.999 | 0.999 | 0.558 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30% PEG4000, 0.1M Tris pH 8.5, 0.2M MgCl2 |