5R1Z
PanDDA analysis group deposition -- Endothiapepsin in complex with fragment F2X-Entry D11, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.170, 73.270, 52.542 |
Unit cell angles | 90.00, 109.23, 90.00 |
Refinement procedure
Resolution | 41.079 - 1.067 |
R-factor | 0.1489 |
Rwork | 0.147 |
R-free | 0.17060 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.079 | 50.000 | 1.130 |
High resolution limit [Å] | 1.070 | 3.190 | 1.070 |
Rmerge | 0.075 | 0.038 | 2.441 |
Rmeas | 0.081 | 0.041 | 2.644 |
Total number of observations | 969129 | ||
Number of reflections | 142135 | 5443 | 22100 |
<I/σ(I)> | 10.17 | 45.18 | 0.71 |
Completeness [%] | 99.1 | 0.996 | 0.956 |
Redundancy | 6.817 | 6.87 | 6.33 |
CC(1/2) | 0.999 | 0.998 | 0.275 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |