5R1U
PanDDA analysis group deposition -- Endothiapepsin in complex with fragment F2X-Entry B03, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.285, 73.030, 52.702 |
Unit cell angles | 90.00, 109.37, 90.00 |
Refinement procedure
Resolution | 42.721 - 1.039 |
R-factor | 0.1273 |
Rwork | 0.127 |
R-free | 0.13920 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.721 | 50.000 | 1.100 |
High resolution limit [Å] | 1.040 | 3.110 | 1.040 |
Rmerge | 0.053 | 0.029 | 1.408 |
Rmeas | 0.057 | 0.031 | 1.530 |
Total number of observations | 1056788 | ||
Number of reflections | 154897 | 5893 | 24817 |
<I/σ(I)> | 13.74 | 59.02 | 1.03 |
Completeness [%] | 99.7 | 0.993 | 0.989 |
Redundancy | 6.822 | 6.85 | 6.5 |
CC(1/2) | 0.999 | 0.999 | 0.597 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |