5QYM
PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 02
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.504, 81.727, 93.446 |
Unit cell angles | 90.00, 108.42, 90.00 |
Refinement procedure
Resolution | 44.600 - 1.470 |
R-factor | 0.2252 |
Rwork | 0.224 |
R-free | 0.22521 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 1.582 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.600 | 50.000 | 1.560 |
High resolution limit [Å] | 1.470 | 4.390 | 1.470 |
Rmerge | 0.060 | 0.035 | 2.494 |
Rmeas | 0.064 | 0.038 | 2.697 |
Total number of observations | 742363 | ||
Number of reflections | 101881 | 4151 | 17018 |
<I/σ(I)> | 11.83 | 49.55 | 0.39 |
Completeness [%] | 99.7 | 0.995 | 0.984 |
Redundancy | 6.92 | 6.92 | 6.69 |
CC(1/2) | 0.999 | 0.999 | 0.339 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 19% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4 |