5QYD
PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry E05a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.219, 82.141, 94.089 |
Unit cell angles | 90.00, 108.47, 90.00 |
Refinement procedure
Resolution | 44.700 - 1.670 |
R-factor | 0.2209 |
Rwork | 0.220 |
R-free | 0.22091 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.008 |
RMSD bond angle | 1.450 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.700 | 50.000 | 1.770 |
High resolution limit [Å] | 1.670 | 4.980 | 1.670 |
Rmerge | 0.093 | 0.041 | 2.933 |
Rmeas | 0.101 | 0.044 | 3.182 |
Total number of observations | 496726 | ||
Number of reflections | 68950 | 2847 | 10927 |
<I/σ(I)> | 10.36 | 41.35 | 0.56 |
Completeness [%] | 98.5 | 0.994 | 0.916 |
Redundancy | 6.823 | 6.85 | 6.11 |
CC(1/2) | 0.999 | 0.999 | 0.313 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 19% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4 |