5QYC
PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry D07a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.731, 81.470, 93.170 |
Unit cell angles | 90.00, 108.64, 90.00 |
Refinement procedure
Resolution | 44.470 - 1.700 |
R-factor | 0.2095 |
Rwork | 0.208 |
R-free | 0.20953 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.009 |
RMSD bond angle | 1.502 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.470 | 50.000 | 1.810 |
High resolution limit [Å] | 1.700 | 5.080 | 1.700 |
Rmerge | 0.088 | 0.047 | 2.482 |
Rmeas | 0.095 | 0.051 | 2.693 |
Total number of observations | 463062 | ||
Number of reflections | 64476 | 2660 | 10439 |
<I/σ(I)> | 10.33 | 33.02 | 0.79 |
Completeness [%] | 99.0 | 0.997 | 0.942 |
Redundancy | 6.814 | 6.68 | 6.17 |
CC(1/2) | 0.998 | 0.997 | 0.374 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 19% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4 |