5QY4
PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry B08a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.301, 81.865, 94.408 |
Unit cell angles | 90.00, 108.95, 90.00 |
Refinement procedure
Resolution | 44.720 - 1.570 |
R-factor | 0.2212 |
Rwork | 0.220 |
R-free | 0.22119 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.008 |
RMSD bond angle | 1.528 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.720 | 50.000 | 1.670 |
High resolution limit [Å] | 1.570 | 4.700 | 1.570 |
Rmerge | 0.058 | 0.029 | 2.478 |
Rmeas | 0.063 | 0.032 | 2.677 |
Total number of observations | 600728 | ||
Number of reflections | 83483 | 3428 | 13433 |
<I/σ(I)> | 13.41 | 54.93 | 0.42 |
Completeness [%] | 98.6 | 0.996 | 0.937 |
Redundancy | 6.84 | 6.75 | 6.39 |
CC(1/2) | 0.999 | 0.999 | 0.348 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 19% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4 |