5QU8
Crystal Structure of symmetric swapped human Nck SH3.1 domain, 0.93A, orthorhombic form IV
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-24 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.00005 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 40.100, 55.170, 27.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.600 - 0.930 |
R-factor | 0.1506 |
Rwork | 0.149 |
R-free | 0.18210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.015 |
RMSD bond angle | 1.842 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.600 | 27.600 | 1.060 |
High resolution limit [Å] | 0.930 | 4.160 | 0.930 |
Rmerge | 0.065 | 0.032 | 14.779 |
Rmeas | 0.072 | 0.035 | 17.331 |
Total number of observations | 196914 | ||
Number of reflections | 36162 | 538 | 8332 |
<I/σ(I)> | 6.8 | 30.93 | 0.17 |
Completeness [%] | 88.1 | 99.1 | 63.6 |
Redundancy | 5.45 | 5.848 | 3.539 |
CC(1/2) | 0.999 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 60% tacsimate pH 7.0 |