5QPM
PanDDA analysis group deposition -- Crystal Structure of T. cruzi FPPS in complex with FMOPL000500a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-07 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91587 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 57.977, 57.977, 395.530 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 65.920 - 1.680 |
R-factor | 0.2109 |
Rwork | 0.209 |
R-free | 0.25390 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1yhk |
RMSD bond length | 0.029 |
RMSD bond angle | 2.033 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 131.840 | 131.840 | 1.720 |
High resolution limit [Å] | 1.680 | 7.510 | 1.680 |
Rmerge | 0.206 | 0.044 | 3.175 |
Rmeas | 0.212 | 0.046 | 3.282 |
Rpim | 0.050 | 0.013 | 0.823 |
Total number of observations | 848619 | 10332 | 53232 |
Number of reflections | 46981 | ||
<I/σ(I)> | 11 | 38.5 | 1.2 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 18.1 | 14.3 | 15.7 |
CC(1/2) | 0.995 | 0.991 | 0.561 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 80 mM MES, 4 mM ZnSO4, 12.36% w/v PEG MME 550, 11.57% v/v glycerol |