5QPF
PanDDA analysis group deposition -- Crystal Structure of T. cruzi FPPS in complex with FMOPL000478a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-07 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 57.900, 57.900, 395.156 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.744 - 1.500 |
R-factor | 0.215 |
Rwork | 0.213 |
R-free | 0.24830 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1yhk |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 98.820 | 98.820 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.122 | 0.046 | 2.130 |
Rmeas | 0.126 | 0.048 | 2.228 |
Rpim | 0.030 | 0.013 | 0.648 |
Total number of observations | 1078620 | 13790 | 54921 |
Number of reflections | 65050 | ||
<I/σ(I)> | 12.9 | 37 | 1.4 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 16.6 | 14.2 | 11.8 |
CC(1/2) | 0.999 | 0.998 | 0.544 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 80 mM MES, 4 mM ZnSO4, 12.36% w/v PEG MME 550, 11.57% v/v glycerol |