Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QOL

PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with FMOPL000435a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Detector technologyPIXEL
Collection date2016-12-05
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.92819
Spacegroup nameP 21 21 21
Unit cell lengths48.270, 60.970, 65.720
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.740 - 1.850
R-factor0.1864
Rwork0.184
R-free0.23270
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)5mp0
RMSD bond length0.019
RMSD bond angle1.943
Data reduction softwareXDS
Data scaling softwareAimless (0.5.29)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.70044.7001.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0700.0240.915
Rmeas0.0760.0260.991
Rpim0.0300.0110.378
Total number of observations11153313518367
Number of reflections17148
<I/σ(I)>15.249.82.1
Completeness [%]99.999.7100
Redundancy6.55.76.8
CC(1/2)0.9991.0000.749
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.52770.1 M acetate, pH 4.5, 5-25% PEG3350

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon