5QMK
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure F2_1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 117.675, 64.243, 74.668 |
| Unit cell angles | 90.00, 125.85, 90.00 |
Refinement procedure
| Resolution | 34.749 - 1.836 |
| R-factor | 0.2369 |
| Rwork | 0.236 |
| R-free | 0.27170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.284 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 34.750 | 34.750 | 1.880 |
| High resolution limit [Å] | 1.840 | 8.990 | 1.840 |
| Rmerge | 0.039 | 0.024 | 0.675 |
| Rmeas | 0.045 | 0.029 | 0.778 |
| Rpim | 0.022 | 0.015 | 0.383 |
| Total number of observations | 160773 | 1157 | 9000 |
| Number of reflections | 39141 | 329 | 2289 |
| <I/σ(I)> | 13.4 | 32 | 1.3 |
| Completeness [%] | 99.0 | 91.1 | 95.1 |
| Redundancy | 4.1 | 3.5 | 3.9 |
| CC(1/2) | 0.999 | 0.993 | 0.850 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
